PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zjn_sc00155.1.g00650.1.sm.mkhc
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 252aa    MW: 27316.8 Da    PI: 6.4237
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zjn_sc00155.1.g00650.1.sm.mkhcgenomeZGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.8e-1176123454
                                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                     ++  rE+ RRdr+N++f eL +++ +    +  Kl+Ka iL  A + + +L
  Zjn_sc00155.1.g00650.1.sm.mkhc  76 SKACREKMRRDRLNDRFLELCSVINPG---KEAKLDKANILSDAARMLAHL 123
                                     6789**********************9...9****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.5E-1465139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.83972123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.08E-875128No hitNo description
PfamPF000101.7E-876123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1277145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-778129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MMHDGGGAGY PVEDLLIIGD GDGDDGDLAI FCHGVPALAG DAGLGIEDDS GDAYGLEQTN  60
LGKRGRNEPS SSGPKSKACR EKMRRDRLND RFLELCSVIN PGKEAKLDKA NILSDAARML  120
AHLRGEAQKL KESNEKLRET IKDLKAEKNE LRDEKVSLKA EKERLEQQVK GMSAAPTGFV  180
PHLPHPTAFH PATHPTAFHP ATFAPFATQH QAPANKSASI PTAAFPGIAM WQWLPQTVMD  240
TTQDPKLWPP NA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004952164.11e-121PREDICTED: transcription factor ILR3-like
SwissprotQ9FH373e-60ILR3_ARATH; Transcription factor ILR3
TrEMBLK3YVD61e-121K3YVD6_SETIT; Uncharacterized protein
STRINGSb04g001200.11e-120(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81733646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-57bHLH family protein